[AMBER] RuntimeError in Pytraj

From: maryam ghorbaninia via AMBER <amber.ambermd.org>
Date: Thu, 2 Mar 2023 22:34:26 +0330

Hi,
In pytraj I cannot load my files.
my scripts were:

*traj = pt.iterload('my-file.nc <http://my-file.nc>', 'my-file.parm7')*
or
*pt.iterload('my_file.pdb')*

and I got this error on both:

*RuntimeError: n_atoms = 0: make sure to load correct Topology filename or
load supported topology (pdb, amber parm, psf, ...)*

I would be grateful if you help me.

Best,
Maryam
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Mar 02 2023 - 11:30:03 PST