I am having troubles installing amber22 in Centos 7. I followed instructions to get cmake and gcc (version 9.2). I also took conda off PATH to avoid conflicts with miniconda. All seems to work until it reaches 94% in make install where I get:
…
[ 94%] Linking C executable xaLeap
../Xraw/libXaw.a(AsciiSrc.c.o): In function `InitStringOrFile':
AsciiSrc.c:(.text+0x131e): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
/usr/lib64/libSM.so: undefined reference to `uuid_unparse_lower.UUID_1.0'
/usr/lib64/libSM.so: undefined reference to `uuid_generate.UUID_1.0'
collect2: error: ld returned 1 exit status
make[2]: *** [AmberTools/src/leap/src/leap/xaLeap] Error 1
make[1]: *** [AmberTools/src/leap/src/leap/CMakeFiles/xaLeap.dir/all] Error 2
make: *** [all] Error 2
I just can’t find a solution to this.
I was able to install AmberTools22 with conda, however I don’t know how to add or include Amber22 to that. If that were possible it could be a solution.
Please, advice. Thanks.
Hugo
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Received on Mon Oct 03 2022 - 15:00:02 PDT
