-- **************************************************************************
-- Starting configuration of Amber version 20.0.0...
-- CMake Version: 3.16.3
-- For how to use this build system, please read this wiki:
--     http://ambermd.org/pmwiki/pmwiki.php/Main/CMake
-- For a list of important CMake variables, check here:
--     http://ambermd.org/pmwiki/pmwiki.php/Main/CMake-Common-Options
-- **************************************************************************
-- Amber source not found, only building AmberTools
-- Downloading Python 3 Miniconda
-- Detected Linux OS. Downloading the Linux installer
-- Using 64 bit miniconda
-- Using cached Miniconda installer at /home/prashant/software/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh
Installing Miniconda Python.
PREFIX=/home/prashant/software/amber20_src/build/CMakeFiles/miniconda/install
Unpacking payload ...

  0%|          | 0/38 [00:00<?, ?it/s]
Extracting : requests-2.25.1-pyhd3eb1b0_0.conda:   0%|          | 0/38 [00:00<?, ?it/s]
Extracting : requests-2.25.1-pyhd3eb1b0_0.conda:   3%|▎         | 1/38 [00:00<00:05,  6.92it/s]
Extracting : cryptography-3.4.7-py39hd23ed53_0.conda:   3%|▎         | 1/38 [00:00<00:05,  6.92it/s]
Extracting : _libgcc_mutex-0.1-main.conda:   5%|▌         | 2/38 [00:00<00:05,  6.92it/s]           
Extracting : urllib3-1.26.6-pyhd3eb1b0_1.conda:   8%|▊         | 3/38 [00:00<00:05,  6.92it/s]
Extracting : pyopenssl-20.0.1-pyhd3eb1b0_1.conda:  11%|█         | 4/38 [00:00<00:04,  6.92it/s]
Extracting : tqdm-4.61.2-pyhd3eb1b0_1.conda:  13%|█▎        | 5/38 [00:00<00:04,  6.92it/s]     
Extracting : pysocks-1.7.1-py39h06a4308_0.conda:  16%|█▌        | 6/38 [00:00<00:04,  6.92it/s]
Extracting : pycosat-0.6.3-py39h27cfd23_0.conda:  18%|█▊        | 7/38 [00:00<00:04,  6.92it/s]
Extracting : pycparser-2.20-py_2.conda:  21%|██        | 8/38 [00:00<00:04,  6.92it/s]         
Extracting : conda-package-handling-1.7.3-py39h27cfd23_1.conda:  24%|██▎       | 9/38 [00:00<00:04,  6.92it/s]
Extracting : six-1.16.0-pyhd3eb1b0_0.conda:  26%|██▋       | 10/38 [00:00<00:04,  6.92it/s]                   
Extracting : readline-8.1-h27cfd23_0.conda:  29%|██▉       | 11/38 [00:00<00:03,  6.92it/s]
Extracting : ncurses-6.2-he6710b0_1.conda:  32%|███▏      | 12/38 [00:00<00:03,  6.92it/s] 
Extracting : ncurses-6.2-he6710b0_1.conda:  34%|███▍      | 13/38 [00:00<00:02,  9.58it/s]
Extracting : ld_impl_linux-64-2.35.1-h7274673_9.conda:  34%|███▍      | 13/38 [00:00<00:02,  9.58it/s]
Extracting : tk-8.6.10-hbc83047_0.conda:  37%|███▋      | 14/38 [00:00<00:02,  9.58it/s]              
Extracting : libffi-3.3-he6710b0_2.conda:  39%|███▉      | 15/38 [00:00<00:02,  9.58it/s]
Extracting : sqlite-3.36.0-hc218d9a_0.conda:  42%|████▏     | 16/38 [00:00<00:02,  9.58it/s]
Extracting : ruamel_yaml-0.15.100-py39h27cfd23_0.conda:  45%|████▍     | 17/38 [00:00<00:02,  9.58it/s]
Extracting : cffi-1.14.6-py39h400218f_0.conda:  47%|████▋     | 18/38 [00:00<00:02,  9.58it/s]         
Extracting : zlib-1.2.11-h7b6447c_3.conda:  50%|█████     | 19/38 [00:00<00:01,  9.58it/s]    
Extracting : libstdcxx-ng-9.3.0-hd4cf53a_17.conda:  53%|█████▎    | 20/38 [00:00<00:01,  9.58it/s]
Extracting : xz-5.2.5-h7b6447c_0.conda:  55%|█████▌    | 21/38 [00:00<00:01,  9.58it/s]           
Extracting : certifi-2021.5.30-py39h06a4308_0.conda:  58%|█████▊    | 22/38 [00:00<00:01,  9.58it/s]
Extracting : certifi-2021.5.30-py39h06a4308_0.conda:  61%|██████    | 23/38 [00:00<00:01, 13.02it/s]
Extracting : brotlipy-0.7.0-py39h27cfd23_1003.conda:  61%|██████    | 23/38 [00:00<00:01, 13.02it/s]
Extracting : wheel-0.36.2-pyhd3eb1b0_0.conda:  63%|██████▎   | 24/38 [00:00<00:01, 13.02it/s]       
Extracting : pip-21.1.3-py39h06a4308_0.conda:  66%|██████▌   | 25/38 [00:00<00:00, 13.02it/s]
Extracting : chardet-4.0.0-py39h06a4308_1003.conda:  68%|██████▊   | 26/38 [00:00<00:00, 13.02it/s]
Extracting : libgomp-9.3.0-h5101ec6_17.conda:  71%|███████   | 27/38 [00:00<00:00, 13.02it/s]      
Extracting : openssl-1.1.1k-h27cfd23_0.conda:  74%|███████▎  | 28/38 [00:00<00:00, 13.02it/s]
Extracting : ca-certificates-2021.7.5-h06a4308_1.conda:  76%|███████▋  | 29/38 [00:00<00:00, 13.02it/s]
Extracting : yaml-0.2.5-h7b6447c_0.conda:  79%|███████▉  | 30/38 [00:00<00:00, 13.02it/s]              
Extracting : setuptools-52.0.0-py39h06a4308_0.conda:  82%|████████▏ | 31/38 [00:00<00:00, 13.02it/s]
Extracting : tzdata-2021a-h52ac0ba_0.conda:  84%|████████▍ | 32/38 [00:00<00:00, 13.02it/s]         
Extracting : libgcc-ng-9.3.0-h5101ec6_17.conda:  87%|████████▋ | 33/38 [00:00<00:00, 13.02it/s]
Extracting : libgcc-ng-9.3.0-h5101ec6_17.conda:  89%|████████▉ | 34/38 [00:00<00:00, 17.12it/s]
Extracting : _openmp_mutex-4.5-1_gnu.tar.bz2:  89%|████████▉ | 34/38 [00:00<00:00, 17.12it/s]  
Extracting : idna-2.10-pyhd3eb1b0_0.tar.bz2:  92%|█████████▏| 35/38 [00:00<00:00, 17.12it/s] 
Extracting : conda-4.10.3-py39h06a4308_0.tar.bz2:  95%|█████████▍| 36/38 [00:00<00:00, 17.12it/s]
Extracting : python-3.9.5-h12debd9_4.tar.bz2:  97%|█████████▋| 37/38 [00:03<00:00, 17.12it/s]    
                                                                                             
Collecting package metadata (current_repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/prashant/software/amber20_src/build/CMakeFiles/miniconda/install

  added / updated specs:
    - _libgcc_mutex==0.1=main
    - _openmp_mutex==4.5=1_gnu
    - brotlipy==0.7.0=py39h27cfd23_1003
    - ca-certificates==2021.7.5=h06a4308_1
    - certifi==2021.5.30=py39h06a4308_0
    - cffi==1.14.6=py39h400218f_0
    - chardet==4.0.0=py39h06a4308_1003
    - conda-package-handling==1.7.3=py39h27cfd23_1
    - conda==4.10.3=py39h06a4308_0
    - cryptography==3.4.7=py39hd23ed53_0
    - idna==2.10=pyhd3eb1b0_0
    - ld_impl_linux-64==2.35.1=h7274673_9
    - libffi==3.3=he6710b0_2
    - libgcc-ng==9.3.0=h5101ec6_17
    - libgomp==9.3.0=h5101ec6_17
    - libstdcxx-ng==9.3.0=hd4cf53a_17
    - ncurses==6.2=he6710b0_1
    - openssl==1.1.1k=h27cfd23_0
    - pip==21.1.3=py39h06a4308_0
    - pycosat==0.6.3=py39h27cfd23_0
    - pycparser==2.20=py_2
    - pyopenssl==20.0.1=pyhd3eb1b0_1
    - pysocks==1.7.1=py39h06a4308_0
    - python==3.9.5=h12debd9_4
    - readline==8.1=h27cfd23_0
    - requests==2.25.1=pyhd3eb1b0_0
    - ruamel_yaml==0.15.100=py39h27cfd23_0
    - setuptools==52.0.0=py39h06a4308_0
    - six==1.16.0=pyhd3eb1b0_0
    - sqlite==3.36.0=hc218d9a_0
    - tk==8.6.10=hbc83047_0
    - tqdm==4.61.2=pyhd3eb1b0_1
    - tzdata==2021a=h52ac0ba_0
    - urllib3==1.26.6=pyhd3eb1b0_1
    - wheel==0.36.2=pyhd3eb1b0_0
    - xz==5.2.5=h7b6447c_0
    - yaml==0.2.5=h7b6447c_0
    - zlib==1.2.11=h7b6447c_3


The following NEW packages will be INSTALLED:

  _libgcc_mutex      pkgs/main/linux-64::_libgcc_mutex-0.1-main
  _openmp_mutex      pkgs/main/linux-64::_openmp_mutex-4.5-1_gnu
  brotlipy           pkgs/main/linux-64::brotlipy-0.7.0-py39h27cfd23_1003
  ca-certificates    pkgs/main/linux-64::ca-certificates-2021.7.5-h06a4308_1
  certifi            pkgs/main/linux-64::certifi-2021.5.30-py39h06a4308_0
  cffi               pkgs/main/linux-64::cffi-1.14.6-py39h400218f_0
  chardet            pkgs/main/linux-64::chardet-4.0.0-py39h06a4308_1003
  conda              pkgs/main/linux-64::conda-4.10.3-py39h06a4308_0
  conda-package-han~ pkgs/main/linux-64::conda-package-handling-1.7.3-py39h27cfd23_1
  cryptography       pkgs/main/linux-64::cryptography-3.4.7-py39hd23ed53_0
  idna               pkgs/main/noarch::idna-2.10-pyhd3eb1b0_0
  ld_impl_linux-64   pkgs/main/linux-64::ld_impl_linux-64-2.35.1-h7274673_9
  libffi             pkgs/main/linux-64::libffi-3.3-he6710b0_2
  libgcc-ng          pkgs/main/linux-64::libgcc-ng-9.3.0-h5101ec6_17
  libgomp            pkgs/main/linux-64::libgomp-9.3.0-h5101ec6_17
  libstdcxx-ng       pkgs/main/linux-64::libstdcxx-ng-9.3.0-hd4cf53a_17
  ncurses            pkgs/main/linux-64::ncurses-6.2-he6710b0_1
  openssl            pkgs/main/linux-64::openssl-1.1.1k-h27cfd23_0
  pip                pkgs/main/linux-64::pip-21.1.3-py39h06a4308_0
  pycosat            pkgs/main/linux-64::pycosat-0.6.3-py39h27cfd23_0
  pycparser          pkgs/main/noarch::pycparser-2.20-py_2
  pyopenssl          pkgs/main/noarch::pyopenssl-20.0.1-pyhd3eb1b0_1
  pysocks            pkgs/main/linux-64::pysocks-1.7.1-py39h06a4308_0
  python             pkgs/main/linux-64::python-3.9.5-h12debd9_4
  readline           pkgs/main/linux-64::readline-8.1-h27cfd23_0
  requests           pkgs/main/noarch::requests-2.25.1-pyhd3eb1b0_0
  ruamel_yaml        pkgs/main/linux-64::ruamel_yaml-0.15.100-py39h27cfd23_0
  setuptools         pkgs/main/linux-64::setuptools-52.0.0-py39h06a4308_0
  six                pkgs/main/noarch::six-1.16.0-pyhd3eb1b0_0
  sqlite             pkgs/main/linux-64::sqlite-3.36.0-hc218d9a_0
  tk                 pkgs/main/linux-64::tk-8.6.10-hbc83047_0
  tqdm               pkgs/main/noarch::tqdm-4.61.2-pyhd3eb1b0_1
  tzdata             pkgs/main/noarch::tzdata-2021a-h52ac0ba_0
  urllib3            pkgs/main/noarch::urllib3-1.26.6-pyhd3eb1b0_1
  wheel              pkgs/main/noarch::wheel-0.36.2-pyhd3eb1b0_0
  xz                 pkgs/main/linux-64::xz-5.2.5-h7b6447c_0
  yaml               pkgs/main/linux-64::yaml-0.2.5-h7b6447c_0
  zlib               pkgs/main/linux-64::zlib-1.2.11-h7b6447c_3


Preparing transaction: ...working... done
Executing transaction: ...working... done
installation finished.
-- Updating and installing required and optional packages...
Collecting package metadata (current_repodata.json): ...working... failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://repo.anaconda.com/pkgs/main/linux-64/current_repodata.json>
Elapsed: -

An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file
a support request with your network engineering team.

'https://repo.anaconda.com/pkgs/main/linux-64'


Requirement already satisfied: pip in ./CMakeFiles/miniconda/install/lib/python3.9/site-packages (21.1.3)
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/pip/
WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/pip/
WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/pip/
WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/pip/
WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/pip/
Could not fetch URL https://pypi.org/simple/pip/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='pypi.org', port=443): Max retries exceeded with url: /simple/pip/ (Caused by SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))) - skipping
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
Could not fetch URL https://pypi.org/simple/pip/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='pypi.org', port=443): Max retries exceeded with url: /simple/pip/ (Caused by SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))) - skipping
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/setuptools/
WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/setuptools/
WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/setuptools/
WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/setuptools/
WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))': /simple/setuptools/
Could not fetch URL https://pypi.org/simple/setuptools/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='pypi.org', port=443): Max retries exceeded with url: /simple/setuptools/ (Caused by SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))) - skipping
ERROR: Could not find a version that satisfies the requirement setuptools==47.3.1 (from versions: none)
ERROR: No matching distribution found for setuptools==47.3.1
Could not fetch URL https://pypi.org/simple/pip/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='pypi.org', port=443): Max retries exceeded with url: /simple/pip/ (Caused by SSLError(SSLError(1, '[SSL: WRONG_VERSION_NUMBER] wrong version number (_ssl.c:1129)'))) - skipping
Collecting package metadata (current_repodata.json): ...working... failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://repo.anaconda.com/pkgs/main/linux-64/current_repodata.json>
Elapsed: -

An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file
a support request with your network engineering team.

'https://repo.anaconda.com/pkgs/main/linux-64'


Collecting package metadata (current_repodata.json): ...working... failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://conda.anaconda.org/conda-forge/linux-64/current_repodata.json>
Elapsed: -

An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.
'https://conda.anaconda.org/conda-forge/linux-64'


Collecting package metadata (current_repodata.json): ...working... failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://repo.anaconda.com/pkgs/main/linux-64/current_repodata.json>
Elapsed: -

An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file
a support request with your network engineering team.

'https://repo.anaconda.com/pkgs/main/linux-64'


Collecting package metadata (current_repodata.json): ...working... failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://repo.anaconda.com/pkgs/main/linux-64/current_repodata.json>
Elapsed: -

An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file
a support request with your network engineering team.

'https://repo.anaconda.com/pkgs/main/linux-64'


CMake Error at cmake/UseMiniconda.cmake:172 (message):
  Installation of packages failed! Please fix what's wrong, or disable
  Miniconda.
Call Stack (most recent call first):
  cmake/PythonInterpreterConfig.cmake:64 (download_and_use_miniconda)
  CMakeLists.txt:121 (include)


-- Configuring incomplete, errors occurred!
See also "/home/prashant/software/amber20_src/build/CMakeFiles/CMakeOutput.log".
See also "/home/prashant/software/amber20_src/build/CMakeFiles/CMakeError.log".