[AMBER] Amber20 Installation run_cmake problem

From: Manuel Fernandez Merino <manuel.fernandez.crg.eu>
Date: Tue, 1 Feb 2022 17:29:00 +0000

Hello,

I just purchased the license for Amber20. Before this, I was running AmberTools21 on an HPC cluster and everything seemed to be running okay. I am now trying to install the whole software. I extracted the source code for AmberTools21 and Amber20 as described in the manual. However, when I run run_cmake, the following error appears:


Error processing line 1 of /amber20_src/build/CMakeFiles/miniconda/install/lib/python3.9/site-packages/distutils-precedence.pth:



  Traceback (most recent call last):

    File /amber20_src/build/CMakeFiles/miniconda/install/lib/python3.9/site.py", line 169, in addpackage

      exec(line)

    File "<string>", line 1, in <module>

  ModuleNotFoundError: No module named '_distutils_hack'



Remainder of file ignored.

This error arises several times throughout the execution of run_cmake, and at the end it says that the configuring could not be done properly. From the research I've been doing, this problem seems to be related to setuptools. But I haven't been able to fix it. Just in case this is useful, I also found out that right before the first error, the following lines are printed:


Collecting setuptools==47.3.1

  Using cached setuptools-47.3.1-py3-none-any.whl (582 kB)

Installing collected packages: setuptools

  Attempting uninstall: setuptools

    Found existing installation: setuptools 60.6.0

    Uninstalling setuptools-60.6.0:

      Successfully uninstalled setuptools-60.6.0

Successfully installed setuptools-47.3.1

Any help would be more than welcome.

Many thanks,

Manuel F. Merino
PhD Candidate
Center for Genomic Regulation
Barcelona, Spain
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Received on Tue Feb 01 2022 - 09:30:02 PST
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