Amber Archive Sep 2021 by thread
181 messages
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Starting
Wed Sep 01 2021 - 08:00:02 PDT,
Ending
Thu Sep 30 2021 - 14:30:03 PDT
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[AMBER] GIST with cosolvents like acetonitrile, ethanol instead of water
Debarati DasGupta
(Wed Sep 01 2021 - 07:37:52 PDT)
[AMBER] Does AmberTools21 have parameters for I atom?
Ming Tang
(Wed Sep 01 2021 - 17:05:07 PDT)
Re: [AMBER] Does AmberTools21 have parameters for I atom?
Matthew Guberman-Pfeffer
(Wed Sep 01 2021 - 17:17:37 PDT)
Re: [AMBER] Does AmberTools21 have parameters for I atom?
Ming Tang
(Wed Sep 01 2021 - 18:21:38 PDT)
Re: [AMBER] Does AmberTools21 have parameters for I atom?
Matthew Guberman-Pfeffer
(Wed Sep 01 2021 - 19:49:18 PDT)
Re: [AMBER] Does AmberTools21 have parameters for I atom?
Ming Tang
(Wed Sep 01 2021 - 20:44:19 PDT)
[AMBER] how to change residue number of several residues in AMBER trajectories
Ming Tang
(Thu Sep 02 2021 - 00:25:16 PDT)
Re: [AMBER] how to change residue number of several residues in AMBER trajectories
Dr. Anselm Horn
(Thu Sep 02 2021 - 01:23:27 PDT)
[AMBER] Hydrogen atoms with negative RESP charges from Antechamber
库米尔
(Thu Sep 02 2021 - 08:23:24 PDT)
[AMBER] Esander and multiple topologies
Matthew Guberman-Pfeffer
(Thu Sep 02 2021 - 10:07:16 PDT)
Re: [AMBER] Esander and multiple topologies
Daniel Roe
(Fri Sep 03 2021 - 13:14:26 PDT)
[AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
wangwei1669
(Sat Sep 04 2021 - 01:03:23 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
David A Case
(Sat Sep 04 2021 - 04:57:34 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
wangwei1669
(Sun Sep 05 2021 - 01:49:14 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
wangwei1669
(Sun Sep 05 2021 - 06:39:05 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
David A Case
(Mon Sep 06 2021 - 13:27:50 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
wangwei1669
(Tue Sep 07 2021 - 20:44:06 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
David A Case
(Wed Sep 08 2021 - 04:49:53 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
wangwei1669
(Wed Sep 08 2021 - 17:56:42 PDT)
Re: [AMBER] A problem about periodic box dimensions happens to Tutorial 1.7
David A Case
(Thu Sep 09 2021 - 05:53:25 PDT)
[AMBER] REMD using multiple gpus
jinfeng liu
(Sun Sep 05 2021 - 06:56:07 PDT)
Re: [AMBER] REMD using multiple gpus
Carlos Simmerling
(Sun Sep 05 2021 - 08:58:56 PDT)
[AMBER] Restart
Henry Green
(Sun Sep 05 2021 - 22:35:11 PDT)
[AMBER] Restart
Henry Green
(Sun Sep 05 2021 - 22:58:33 PDT)
[AMBER] Restart
Henry Green
(Sun Sep 05 2021 - 23:21:31 PDT)
Re: [AMBER] Restart
Henry Green
(Mon Sep 06 2021 - 06:45:34 PDT)
Re: [AMBER] Restart
Dr. Anselm Horn
(Mon Sep 06 2021 - 08:10:00 PDT)
[AMBER] Restart
Henry Green
(Mon Sep 06 2021 - 20:08:17 PDT)
Re: [AMBER] Restart
David A Case
(Thu Sep 09 2021 - 08:54:30 PDT)
[AMBER] Restart
Henry Green
(Sun Sep 05 2021 - 22:52:20 PDT)
[AMBER] How to print out implicit solvent charges?
Matthew Guberman-Pfeffer
(Mon Sep 06 2021 - 00:33:02 PDT)
Re: [AMBER] How to print out implicit solvent charges?
Carlos Simmerling
(Mon Sep 06 2021 - 02:44:55 PDT)
Re: [AMBER] How to print out implicit solvent charges?
Matthew Guberman-Pfeffer
(Mon Sep 06 2021 - 02:53:29 PDT)
Re: [AMBER] How to print out implicit solvent charges?
David A Case
(Mon Sep 06 2021 - 05:52:51 PDT)
Re: [AMBER] How to print out implicit solvent charges?
Matthew Guberman-Pfeffer
(Wed Sep 08 2021 - 10:59:34 PDT)
Re: [AMBER] Problem with metalpdb2mol2.py script
Pengfei Li
(Mon Sep 06 2021 - 15:18:34 PDT)
Re: [AMBER] iron-sulfur clusters parameters
Pengfei Li
(Mon Sep 06 2021 - 15:29:47 PDT)
Re: [AMBER] Suggestions for Mn3O4
Pengfei Li
(Mon Sep 06 2021 - 15:33:51 PDT)
Re: [AMBER] how to set distance restraints in amber
Pengfei Li
(Mon Sep 06 2021 - 15:48:17 PDT)
Re: [AMBER] how to set distance restraints in amber
Daniel Roe
(Tue Sep 07 2021 - 06:39:45 PDT)
Re: [AMBER] Maximum coordination exceeded
Pengfei Li
(Mon Sep 06 2021 - 15:56:44 PDT)
Re: [AMBER] How to set a replusive force between two drug molecules or two atoms.
Pengfei Li
(Mon Sep 06 2021 - 16:14:05 PDT)
Re: [AMBER] How to set a replusive force between two drug molecules or two atoms.
neildancer
(Tue Sep 07 2021 - 02:23:09 PDT)
[AMBER] atom type issue in tleap with ff-nucleic-OL15
Aliakbartehrani Zahra
(Tue Sep 07 2021 - 03:49:37 PDT)
Re: [AMBER] atom type issue in tleap with ff-nucleic-OL15
David A Case
(Wed Sep 08 2021 - 05:02:23 PDT)
[AMBER] Positional restraints in thermodynamic integration
임호철
(Tue Sep 07 2021 - 06:35:53 PDT)
[AMBER] Positional restraints in thermodynamic integration
LEO LIM
(Wed Sep 08 2021 - 01:40:48 PDT)
Re: [AMBER] Positional restraints in thermodynamic integration
Carlos Simmerling
(Wed Sep 08 2021 - 03:18:00 PDT)
Re: [AMBER] Positional restraints in thermodynamic integration
Carlos Simmerling
(Thu Sep 09 2021 - 14:39:35 PDT)
Re: [AMBER] Positional restraints in thermodynamic integration
LEO LIM
(Fri Sep 10 2021 - 04:58:53 PDT)
[AMBER] Explicit water molecules in MMPBSA.py: OPC vs TIP3P
Lennart Gundelach
(Wed Sep 08 2021 - 04:33:36 PDT)
Re: [AMBER] Explicit water molecules in MMPBSA.py: OPC vs TIP3P
Ray Luo
(Wed Sep 08 2021 - 08:31:04 PDT)
[AMBER] antechamber raises Segmetation fault
yinchaofan
(Wed Sep 08 2021 - 04:42:12 PDT)
[AMBER] GIST question
Reyes Nuñez Franco
(Wed Sep 08 2021 - 09:24:25 PDT)
Re: [AMBER] GIST question
Franz Waibl
(Thu Sep 09 2021 - 01:46:05 PDT)
Re: [AMBER] GIST question
Reyes Nuñez Franco
(Mon Sep 13 2021 - 03:23:59 PDT)
Re: [AMBER] GIST question
Franz Waibl
(Tue Sep 14 2021 - 10:03:01 PDT)
Re: [AMBER] GIST question
Reyes Nuñez Franco
(Wed Sep 15 2021 - 05:59:09 PDT)
Re: [AMBER] GIST question
Daniel Roe
(Fri Sep 17 2021 - 10:10:38 PDT)
Re: [AMBER] GIST question
Reyes Nuñez Franco
(Thu Sep 23 2021 - 03:34:24 PDT)
[AMBER] ModuleNotFoundError: No module named 'alamdcrd'
Sadaf Rani
(Thu Sep 09 2021 - 07:13:43 PDT)
Re: [AMBER] ModuleNotFoundError: No module named 'alamdcrd'
David A Case
(Thu Sep 09 2021 - 10:34:19 PDT)
[AMBER] TI simulation for ligand vanishing
Delwakkada Liyanage, Senal Dinuka
(Thu Sep 09 2021 - 09:45:30 PDT)
[AMBER] guv output file format
Priya Dey
(Fri Sep 10 2021 - 00:28:36 PDT)
Re: [AMBER] guv output file format
David A Case
(Fri Sep 10 2021 - 04:52:49 PDT)
[AMBER] How to compute pairwise interaction between masks
Matthew Guberman-Pfeffer
(Fri Sep 10 2021 - 14:26:27 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Dr. Anselm Horn
(Mon Sep 13 2021 - 02:11:46 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Matthew Guberman-Pfeffer
(Mon Sep 13 2021 - 02:26:15 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Dr. Anselm Horn
(Mon Sep 13 2021 - 06:31:15 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Matthew Guberman-Pfeffer
(Mon Sep 13 2021 - 17:54:37 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Debarati DasGupta
(Mon Sep 13 2021 - 04:50:53 PDT)
Re: [AMBER] How to compute pairwise interaction between masks
Dr. Anselm Horn
(Mon Sep 13 2021 - 06:19:43 PDT)
[AMBER] [Amber] gbnsr6 doesn't calculate VDWAALS
Rohanizeidanlou, Sahar
(Sun Sep 12 2021 - 12:57:44 PDT)
Re: [AMBER] [Amber] gbnsr6 doesn't calculate VDWAALS
David A Case
(Mon Sep 13 2021 - 05:35:51 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
Oscar Conchillo-Solé
(Mon Sep 13 2021 - 03:51:57 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
Oscar Conchillo-Solé
(Mon Sep 13 2021 - 04:53:52 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
David A Case
(Mon Sep 13 2021 - 05:41:28 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
Oscar Conchillo-Solé
(Mon Sep 13 2021 - 10:56:37 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
David A Case
(Mon Sep 13 2021 - 12:32:25 PDT)
Re: [AMBER] Amber20 installation, Amber.pip file broken
Oscar Conchillo-Solé
(Tue Sep 14 2021 - 05:08:08 PDT)
[AMBER] PARMED Charmber User Warning Quesiton
Matthew Guberman-Pfeffer
(Mon Sep 13 2021 - 04:18:00 PDT)
Re: [AMBER] PARMED Charmber User Warning Quesiton
Jason Swails
(Tue Sep 14 2021 - 13:49:39 PDT)
Re: [AMBER] PARMED Charmber User Warning Quesiton
Matthew Guberman-Pfeffer
(Tue Sep 14 2021 - 16:31:10 PDT)
[AMBER] cudaMemcpyToSymbol: SetSim copy to cSim failed invalid device symbol
ARITRA MITRA
(Mon Sep 13 2021 - 08:58:22 PDT)
Re: [AMBER] cudaMemcpyToSymbol: SetSim copy to cSim failed invalid device symbol
ARITRA MITRA
(Mon Sep 13 2021 - 09:05:31 PDT)
Re: [AMBER] cudaMemcpyToSymbol: SetSim copy to cSim failed invalid device symbol
David A Case
(Mon Sep 13 2021 - 12:22:41 PDT)
[AMBER] Zinc is escaping position restraint
Debostuti Ghoshdastidar
(Tue Sep 14 2021 - 02:45:47 PDT)
Re: [AMBER] Zinc is escaping position restraint
Carlos Simmerling
(Tue Sep 14 2021 - 04:01:50 PDT)
Re: [AMBER] Zinc is escaping position restraint
Elvis A F Martis
(Tue Sep 14 2021 - 18:14:57 PDT)
[AMBER] Problem with AMBER20 aMD tutorial
Michael Shokhen
(Wed Sep 15 2021 - 05:33:08 PDT)
Re: [AMBER] Problem with AMBER20 aMD tutorial
Daniel Roe
(Fri Sep 17 2021 - 10:19:19 PDT)
Re: [AMBER] Problem with AMBER20 aMD tutorial
Michael Shokhen
(Wed Sep 22 2021 - 05:28:47 PDT)
[AMBER] ambermd.org SSL Certificate
Ryan Novosielski
(Wed Sep 15 2021 - 08:44:58 PDT)
Re: [AMBER] ambermd.org SSL Certificate
David A Case
(Wed Sep 15 2021 - 09:44:27 PDT)
[AMBER] Lipid21
Alyemni, Saleh
(Wed Sep 15 2021 - 23:40:10 PDT)
Re: [AMBER] Lipid21
Stephan Schott
(Thu Sep 16 2021 - 01:09:52 PDT)
[AMBER] Non-integer pbsa surface charge?
Matthew Guberman-Pfeffer
(Thu Sep 16 2021 - 01:14:16 PDT)
Re: [AMBER] Non-integer pbsa surface charge?
David A Case
(Thu Sep 16 2021 - 05:18:51 PDT)
Re: [AMBER] Non-integer pbsa surface charge?
Matthew Guberman-Pfeffer
(Thu Sep 16 2021 - 11:56:13 PDT)
Re: [AMBER] Non-integer pbsa surface charge?
David A Case
(Sat Sep 18 2021 - 05:01:26 PDT)
[AMBER] Error while running make install
Rodrigo da Silva Bitzer
(Thu Sep 16 2021 - 15:50:50 PDT)
Re: [AMBER] Error while running make install
David A Case
(Fri Sep 17 2021 - 05:15:33 PDT)
Re: [AMBER] Error while running make install
Rodrigo da Silva Bitzer
(Fri Sep 17 2021 - 05:23:31 PDT)
Re: [AMBER] Error while running make install
David A Case
(Fri Sep 17 2021 - 11:08:02 PDT)
[AMBER] Use Amber12 with cuda
Rana Rehan Khalid
(Thu Sep 16 2021 - 20:01:43 PDT)
Re: [AMBER] Use Amber12 with cuda
Dr. Anselm Horn
(Fri Sep 17 2021 - 02:05:30 PDT)
[AMBER] New In CPPTRAJ (September 2021)
Daniel Roe
(Fri Sep 17 2021 - 13:05:39 PDT)
[AMBER] Is AMBER multithreaded?
James Kress
(Fri Sep 17 2021 - 14:44:42 PDT)
Re: [AMBER] Is AMBER multithreaded?
David A Case
(Fri Sep 17 2021 - 18:13:53 PDT)
[AMBER] Setting compiler flags w/cmake build? Amber20/AmberTools21
Ryan Novosielski
(Sat Sep 18 2021 - 16:41:49 PDT)
Re: [AMBER] Setting compiler flags w/cmake build? Amber20/AmberTools21
David A Case
(Sun Sep 19 2021 - 05:18:19 PDT)
Re: [AMBER] Setting compiler flags w/cmake build? Amber20/AmberTools21
Ryan Novosielski
(Sun Sep 19 2021 - 12:39:10 PDT)
Re: [AMBER] Setting compiler flags w/cmake build? Amber20/AmberTools21
Ryan Novosielski
(Sun Sep 19 2021 - 13:19:05 PDT)
Re: [AMBER] cpptraj has stopped working
Mike Mazanetz
(Sun Sep 19 2021 - 00:39:15 PDT)
Re: [AMBER] cpptraj has stopped working
David A Case
(Sun Sep 19 2021 - 05:23:02 PDT)
Re: [AMBER] cpptraj has stopped working
Daniel Roe
(Sun Sep 19 2021 - 05:23:57 PDT)
[AMBER] cpptraj has stopped working
Mike Mazanetz
(Sun Sep 19 2021 - 13:57:17 PDT)
Re: [AMBER] cpptraj has stopped working
Daniel Roe
(Mon Sep 20 2021 - 06:28:02 PDT)
[AMBER] NVIDIA RTX3080s or 3090s for servers?
Kevin Hauser
(Mon Sep 20 2021 - 08:20:07 PDT)
[AMBER] Restart/Reference file for targeted MD
Rafał Madaj
(Tue Sep 21 2021 - 05:16:27 PDT)
[AMBER] Reduced Units
Chloe Jaiswal
(Tue Sep 21 2021 - 23:10:54 PDT)
Re: [AMBER] Reduced Units
David A Case
(Wed Sep 22 2021 - 04:39:37 PDT)
[AMBER] How to set up a simulation keeping crystal waters in the binding site
Sadaf Rani
(Wed Sep 22 2021 - 08:00:12 PDT)
Re: [AMBER] How to set up a simulation keeping crystal waters in the binding site
Carlos Simmerling
(Wed Sep 22 2021 - 08:30:28 PDT)
[AMBER] Cpptraj hbond criteria
Veenis, Andrew Jay
(Wed Sep 22 2021 - 11:03:40 PDT)
[AMBER] Question regarding LIE calculations vs explicit solvent enthalpy calculations?
Liao
(Thu Sep 23 2021 - 12:36:55 PDT)
Re: [AMBER] Question regarding LIE calculations vs explicit solvent enthalpy calculations?
David A Case
(Thu Sep 23 2021 - 18:52:39 PDT)
Re: [AMBER] Question regarding LIE calculations vs explicit solvent enthalpy calculations?
Liao
(Thu Sep 23 2021 - 20:05:19 PDT)
Re: [AMBER] Question regarding LIE calculations vs explicit solvent enthalpy calculations?
Liao
(Thu Sep 23 2021 - 20:19:00 PDT)
Re: [AMBER] Question regarding LIE calculations vs explicit solvent enthalpy calculations?
Debarati DasGupta
(Fri Sep 24 2021 - 12:40:34 PDT)
[AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Thu Sep 23 2021 - 12:50:29 PDT)
Re: [AMBER] Error installing amber macOS M1
David A Case
(Thu Sep 23 2021 - 18:07:35 PDT)
Re: [AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Fri Sep 24 2021 - 15:33:19 PDT)
Re: [AMBER] Error installing amber macOS M1
David A Case
(Fri Sep 24 2021 - 18:04:22 PDT)
Re: [AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Tue Sep 28 2021 - 10:55:55 PDT)
Re: [AMBER] Error installing amber macOS M1
David A Case
(Tue Sep 28 2021 - 13:00:53 PDT)
Re: [AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Tue Sep 28 2021 - 13:39:17 PDT)
Re: [AMBER] Error installing amber macOS M1
David A Case
(Tue Sep 28 2021 - 18:40:09 PDT)
Re: [AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Thu Sep 30 2021 - 10:16:56 PDT)
Re: [AMBER] Error installing amber macOS M1
David A Case
(Thu Sep 30 2021 - 11:01:36 PDT)
Re: [AMBER] Error installing amber macOS M1
Rodrigo da Silva Bitzer
(Thu Sep 30 2021 - 14:06:08 PDT)
[AMBER] Custom Residue frcmod
Chloe Jaiswal
(Fri Sep 24 2021 - 01:38:24 PDT)
Re: [AMBER] Custom Residue frcmod
David A Case
(Fri Sep 24 2021 - 04:35:37 PDT)
[AMBER] Co-ordinates switching in CPPTRAJ output
Annabelle Hartt
(Fri Sep 24 2021 - 07:37:08 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Carlos Simmerling
(Fri Sep 24 2021 - 08:07:42 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Daniel Roe
(Fri Sep 24 2021 - 08:20:17 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Annabelle Hartt
(Mon Sep 27 2021 - 01:50:17 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Carlos Simmerling
(Mon Sep 27 2021 - 03:03:15 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Annabelle Hartt
(Mon Sep 27 2021 - 03:15:00 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Carlos Simmerling
(Mon Sep 27 2021 - 06:45:28 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Daniel Roe
(Mon Sep 27 2021 - 07:16:01 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Daniel Roe
(Mon Sep 27 2021 - 08:35:44 PDT)
Re: [AMBER] Co-ordinates switching in CPPTRAJ output
Annabelle Hartt
(Mon Sep 27 2021 - 09:19:22 PDT)
[AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Matthew Guberman-Pfeffer
(Sat Sep 25 2021 - 09:09:30 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Carlos Simmerling
(Sat Sep 25 2021 - 09:27:03 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Matthew Guberman-Pfeffer
(Sat Sep 25 2021 - 09:28:33 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Carlos Simmerling
(Sat Sep 25 2021 - 10:22:05 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Matthew Guberman-Pfeffer
(Sat Sep 25 2021 - 11:18:37 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Thomas Cheatham
(Sat Sep 25 2021 - 11:23:30 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Matthew Guberman-Pfeffer
(Sat Sep 25 2021 - 11:33:15 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Daniel Roe
(Sat Sep 25 2021 - 12:10:21 PDT)
Re: [AMBER] Can a PDB be loaded directly into cpptraj without a topology?
Carlos Simmerling
(Sat Sep 25 2021 - 12:36:42 PDT)
[AMBER] parmed for 12-6-4 LJ (Geng Dong)
东庚
(Sun Sep 26 2021 - 02:28:46 PDT)
Re: [AMBER] parmed for 12-6-4 LJ (Geng Dong)
Jason Swails
(Mon Sep 27 2021 - 11:28:19 PDT)
[AMBER] parmed for 12-6-4 LJ (Geng Dong)
东庚
(Tue Sep 28 2021 - 02:07:03 PDT)
[AMBER] zero torsion in DUMPAVE file in a sander run
jamal kazazi
(Sun Sep 26 2021 - 23:16:46 PDT)
Re: [AMBER] zero torsion in DUMPAVE file in a sander run
jamal kazazi
(Mon Sep 27 2021 - 09:18:17 PDT)
[AMBER] TI in membrane system
Rafał Madaj
(Mon Sep 27 2021 - 01:22:36 PDT)
[AMBER] Amber20 installation
vivek rabha
(Mon Sep 27 2021 - 03:33:28 PDT)
Re: [AMBER] Amber20 installation
David A Case
(Mon Sep 27 2021 - 05:08:05 PDT)
[AMBER] Seeking advice on computing interaction energies
Matthew Guberman-Pfeffer
(Mon Sep 27 2021 - 15:42:19 PDT)
[AMBER] problem about the absolutely binding free energy calculation
neildancer.sina.com
(Mon Sep 27 2021 - 22:39:51 PDT)
Re: [AMBER] problem about the absolutely binding free energy calculation
Song, Lin
(Tue Sep 28 2021 - 12:43:33 PDT)
[AMBER] Atom type of NO does not shown up in PARMCHK.DAT
Reza Esmaeeli
(Tue Sep 28 2021 - 11:38:31 PDT)
Re: [AMBER] Atom type of NO does not shown up in PARMCHK.DAT
David A Case
(Tue Sep 28 2021 - 13:09:58 PDT)
Re: [AMBER] Atom type of NO does not shown up in PARMCHK.DAT
Reza Esmaeeli
(Wed Sep 29 2021 - 10:26:57 PDT)
[AMBER] 回复：Re: problem about the absolutely binding free energy calculation
neildancer.sina.com
(Tue Sep 28 2021 - 20:21:27 PDT)
[AMBER] How to combine the coordinate and parm7 files of the glycolipid into a protein complex system
neildancer.sina.com
(Tue Sep 28 2021 - 20:47:14 PDT)
Re: [AMBER] How to combine the coordinate and parm7 files of the glycolipid into a protein complex system
David A Case
(Wed Sep 29 2021 - 05:47:47 PDT)
[AMBER] Problem in installing AMBER 20 Ubantu ; configuring molecules from own data obtained from Gaussian
Satya Pal Singh
(Tue Sep 28 2021 - 22:18:11 PDT)
Re: [AMBER] Problem in installing AMBER 20 Ubantu ; configuring molecules from own data obtained from Gaussian
David A Case
(Wed Sep 29 2021 - 05:58:51 PDT)
Last message date
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Thu Sep 30 2021 - 14:30:03 PDT
Archived on
: Fri Dec 20 2024 - 05:56:09 PST
181 messages
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