Re: [AMBER] [Amber] Convert pqr to pdb

From: Daniel Roe <>
Date: Fri, 13 Aug 2021 15:11:03 -0400


Cpptraj should be able to read PQR files. Try 'cpptraj -p file.pqr -y
file.pqr -x output.pdb' to convert from PQR to PDB on the command
line. See the manual for full details.


On Fri, Aug 13, 2021 at 2:21 PM Rohanizeidanlou, Sahar
<> wrote:
> Dear Amber team,
> I want to convert a pqr file to pdb format and eventually generate top and crd files. I couldn't' find any utility in Amber manual that could facilitate this. I appreciate if you could guide me on this.
> Best regards,
> Sahar
> _______________________________________________
> AMBER mailing list

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Received on Fri Aug 13 2021 - 12:30:03 PDT
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