Re: [AMBER] [MCPB.py]_KeyError: 'HZ3'

From: sabrine kh <sabrine.khelifa.gmail.com>
Date: Tue, 8 Jun 2021 15:16:42 +0200

On Mon, Jun 7, 2021 at 5:40 PM sabrine kh <sabrine.khelifa.gmail.com> wrote:

> Hello sir,
> Herein the input file
> Thank you
>
> On Mon, Jun 7, 2021 at 2:27 PM Gustaf Olsson <gustaf.olsson.lnu.se> wrote:
>
>> You will most likely get a better response from someone who has
>> experience using MCPB, however it seems that “HZ3” would be a hydrogen atom
>> label?
>>
>> A quick guess would be that either it is located in an “bad” place or is
>> not implemented for use with MCPB.
>>
>> Just based on these guesses, do you have a HZ3 atom in your input PDB
>> file? Is everything lined up properly in the input structure file?
>>
>> Best regards
>> // Gustaf
>>
>>
>> On 7 Jun 2021, at 14:03, sabrine kh <sabrine.khelifa.gmail.com<mailto:
>> sabrine.khelifa.gmail.com>> wrote:
>>
>> HZ3
>>
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>>
>


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Received on Tue Jun 08 2021 - 06:30:03 PDT
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