Hi,
I'm using secstruct on cpptraj to analyze the secondary structure of my trajectory. It produces an error "Error: Too many bridges for 248 (to 54)". I'm using cpptraj on Amber/20 and charmm forcefields. The command I used for my calculation is "secstruct :1-587 out dssp.gnu nameh HN ".
Any help would be greatly appreciated!
Thank you,
-Dimuthu
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Received on Wed Mar 10 2021 - 20:00:02 PST
