Dear Rodrigo,
Yes, fine, it is an alternative and extracted better the variables
to plot. Possibly it is the way to go, yet , at least for pmemd outputs,
it seems to me to be more complete than the perl scripts.
Thank you,
Jorge
On 10/17/20 6:45 PM, Rodrigo Galindo-Murillo wrote:
> You can use CPPTRAJ to read the out files from sander/pmemd. A working
> example is available here:
>
> https://amberhub.chpc.utah.edu/reading-the-out-files-and-plotting-different-properties/
>
> Hope that helps!
> Rodrigo.
>
> On Sat, Oct 17, 2020 at 3:31 PM Jorge Iulek <jiulek.gmail.com> wrote:
>> Dear all,
>>
>>
>> I would like to check the "stabilization" of some pmemd runs. Are
>> there versions of process_minout.perl and process_mdout.perl tailored
>> for the output of pmemd?
>>
>> Thank you,
>>
>>
>>
>> Jorge
>>
>>
>>
>>
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Received on Sun Oct 18 2020 - 11:00:02 PDT
