Yes! It worked properly!
Thank you very much for your help!
Lucas Bandeira
On Tue, Oct 22, 2019 at 9:42 AM David A Case <david.case.rutgers.edu> wrote:
> On Mon, Oct 21, 2019, Lucas Bandeira wrote:
> >
> >I'm trying to add NaOH in a water box. What I did was: I removed one
> >hydrogen from the water pdb and used pdb4amber to "correct" it. I've also
> >used antechamber to create OH⁻ óns parameters. However, I have the
> >following warnings and errors:
> >
> >>>Unknown residue: OH number: 2676 type: Nonterminal
>
> You are loading the PDB file before you have loaded the mol2 file that
> defines the OH unit. Try putting the loadPdb command right before the
> saveAmberParm command.
>
> ...dac
>
>
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Received on Tue Oct 22 2019 - 14:30:02 PDT
