Re: [AMBER] Some short Catalina experience

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Thu, 17 Oct 2019 14:41:13 -0400

I agree with Scott

Hai

On Thu, Oct 17, 2019 at 2:02 PM Scott Brozell <sbrozell.iqb.rutgers.edu>
wrote:

> Hi,
>
> Computer support departments at major institutions are still
> sending emails indicating:
> "Do not upgrade to 10.15".
>
> It is my experience that quickly upgrading macOS is not wise
> even in the absence of the something like the above.
>
> scott
>
> On Thu, Oct 17, 2019 at 01:49:13PM -0400, David A Case wrote:
> > For what it's worth:
> >
> >
> > I tried to follow as closely as possible the simple instructions at
> > ambermd.org/Installation.php using Catalina:
> >
> > reinstalled xquartz
> > installed Xcode version 11.1
> > installed the Mojave version of gfortran
> > set my MACOSX_DEPLOYMENT_TARGET variable to '10.15'
> > installed a fresh miniconda version as configure suggested
> >
> > ./configure -macAccelerate clang
> > source amber.sh
> > make install
> > make test
> >
> > No compilation problems, no missing include files, etc. I did have to
> > tell OSX to allow the gfortran libraries to be used (even though they
> > came from an "unknown" developer.)
> >
> > Tests (so far only with the serial version) gave some funny errors
> > for some cpptraj tests (especially with DSSP), but no other errors.
> > Python-related stuff seemed to work fine.
> >
> > The cpptraj errors certainly need to be looked into, and are odd, given
> > that nobody else has been reporting these sorts of error. On the other
> > hand, I'm not seeing the difficulties others have reported.
> >
> > ...more later, including efforts to use the MacPorts compilers.
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Oct 17 2019 - 12:00:02 PDT
Custom Search