[AMBER] ff19SB update

From: Åsmund Røhr Kjendseth <asmund.rohr.nmbu.no>
Date: Wed, 16 Oct 2019 13:10:05 +0000

Dear developers,

I just recompiled AmberTools 19 and Amber 18 with the last upgrades to enable simulations with the ff19SB FF. In the initial minimization the information below (including the CMAP term) is printed. However, when running pmemd (CUDA version) no CMAP information whatsoever is printed. update_amber tells me that no additional updates are available.

Maybe the CUDA version isn’t updated yet?

Cheers,

Åsmund Røhr Kjendseth


| CMAP information read from topology file:

| Memory Use Allocated
| Real 7195896
| Hollerith 278957
| Integer 4120458
| Max Pairs 4970995
| nblistReal 1035624
| nblist Int 2972152
| Total 112521 kbytes

| Note: 1-4 EEL scale factors are being read from the topology file.

| Note: 1-4 VDW scale factors are being read from the topology file.
| Duplicated 0 dihedrals
| Duplicated 0 dihedrals
|CMAP: Reticulating splines.

………

   NSTEP ENERGY RMS GMAX NAME NUMBER
     10 -3.4871E+05 1.1031E-01 1.1542E+01 CD 5466

BOND = 68530.4819 ANGLE = 1311.1021 DIHED = 2237.4689
VDWAALS = 81088.9513 EEL = -525260.1112 HBOND = 0.0000
1-4 VDW = 1627.8336 1-4 EEL = 21433.1020 RESTRAINT = 0.0000
CMAP = 321.0570

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Received on Wed Oct 16 2019 - 06:30:04 PDT
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