Dear Amber Users,
I am trying to generate topology and parameters files for a protein
containing my own amino acid (unit).
I attach my tleap.in, PDB and leap.log files together with some parameter
files I use as the input.
The issue is that I get an error saying that vdW parameters are missing
for virtually every atom even though I can see them correctly defined
in leaprc.ff99SBildn and parm99.dat. What could be the problem?
Best regards,
Dawid Grabarek
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Received on Tue Oct 08 2019 - 09:30:02 PDT
