Date: Tue, 9 Jul 2019 14:41:45 +0000
Hi,
I'm writting to you today because I need some precision about the parameters in Amber ff14SB.
I gave you on this email a screenshot of page 8 and 9 in the supporting information of amberff14SB which discribe the parameters of ff14SB.
On page 8 and page 9, you can see the amino acid PHE and TYR. They say that the bêta carbon "CB" is a atom type of 2C as you can see (I highlighted in red for more clarity).
But in fact, on amberff14sb, it is still an atom type of CT when I compare...
So my question is: Why did they not change the atom type? Is that an error ?
Thank you some much for your time and have a great day
Dylan
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(image/png attachment: INFO_amber14sb_p.8-9.png)
