Re: [AMBER] Fwd: amber installation problem

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Sat, 6 Jul 2019 03:32:51 -0700

See the setup instructions - if bash, there's an amber.sh.

Bill

On 7/6/19 3:24 AM, Charu Sharma (JRF) wrote:
> Sir how to set environment variable for Amber.
>
> On Sat, Jul 6, 2019, 15:53 Charu Sharma (JRF) <charu.sharma.lnmiit.ac.in>
> wrote:
>
>> Sir it giving no such file or directory
>>
>> On Sat, Jul 6, 2019, 13:24 Elvis Martis <elvis_bcp.elvismartis.in> wrote:
>>
>>> Then Amber is either not installed (perhaps deleted by accident) or the
>>> environment variables are not set correctly.
>>> Can you check if amber is present in /opt/amber<version>?
>>>
>>>
>>> On Saturday, July 6, 2019, Charu Sharma (JRF) <charu.sharma.lnmiit.ac.in>
>>> wrote:
>>>
>>>> It says no such file or directory
>>>>
>>>> On Sat, Jul 6, 2019, 13:15 Elvis Martis <elvis_bcp.elvismartis.in>
>>> wrote:
>>>>> Ok.
>>>>> What is the output when you type
>>>>>> which sander?
>>>>> On Saturday, July 6, 2019, Charu Sharma (JRF) <
>>> charu.sharma.lnmiit.ac.in
>>>>> wrote:
>>>>>
>>>>>> Yes sir I have worked on this earlier.
>>>>>>
>>>>>> On Sat, Jul 6, 2019, 13:03 Elvis Martis <elvis_bcp.elvismartis.in>
>>>>> wrote:
>>>>>>> Are you sure Amber is installed on this system?
>>>>>>>
>>>>>>>
>>>>>>> On Saturday, July 6, 2019, Charu Sharma (JRF) <
>>>>> charu.sharma.lnmiit.ac.in
>>>>>>> wrote:
>>>>>>>
>>>>>>>> ---------- Forwarded message ---------
>>>>>>>> From: KARISHMA SHARMA <18pph003.lnmiit.ac.in>
>>>>>>>> Date: Sat, Jul 6, 2019, 12:56
>>>>>>>> Subject: amber installation problem
>>>>>>>> To: Charu Sharma (JRF) <charu.sharma.lnmiit.ac.in>
>>>>>>>>
>>>>>>>>
>>>>>>>> Dear all,
>>>>>>>> I want to know how to remove this error of installation so that
>>> i
>>>>> could
>>>>>>>> start again my work in xleap . previously it was showing xleap
>>> but
>>>>> this
>>>>>>>> time it does not showing. What kind of possible regions that
>>> this
>>>>>> problem
>>>>>>>> occurring again and again.
>>>>>>>> *KARISHMA SHARMA*
>>>>>>>> *JRF (JUNIOR RESEARCH FELLOW)*
>>>>>>>> *PhD SCHOLAR, LNMIIT*
>>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> Best Regards
>>>>>>> Elvis Martis
>>>>>>> Mumbai.
>>>>>>> _______________________________________________
>>>>>>> AMBER mailing list
>>>>>>> AMBER.ambermd.org
>>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>>
>>>>>> _______________________________________________
>>>>>> AMBER mailing list
>>>>>> AMBER.ambermd.org
>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>
>>>>>
>>>>> --
>>>>> Best Regards
>>>>> Elvis Martis
>>>>> Mumbai.
>>>>> _______________________________________________
>>>>> AMBER mailing list
>>>>> AMBER.ambermd.org
>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>
>>>> _______________________________________________
>>>> AMBER mailing list
>>>> AMBER.ambermd.org
>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>
>>>
>>> --
>>> Best Regards
>>> Elvis Martis
>>> Mumbai.
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
> _______________________________________________
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Received on Sat Jul 06 2019 - 04:00:02 PDT
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