I agree with Vítor, packmol is a fantastic option. I have been using it since 2010 and it is now included in AmberTools so if you are running a recent version, you already have it installed.
I have heard coworkers and other people ising CHARM-GUI Membrane Builder to prepare input files: http://charmm-gui.org/?doc=input/membrane.bilayer with great success. Any of these options should work.
Best regards
// Gustaf
On 5 Jul 2019, at 11:02, Vítor Felix <
vitor.felix.ua.pt<mailto:
vitor.felix.ua.pt>> wrote:
Dear Maria
Packmol is a suitable option
Vítor
Sent from my iPhone
On 5 Jul 2019, at 09:46, Maria Bzówka <m.bzowka.tunnelinggroup.pl<mailto:m.bzowka.tunnelinggroup.pl>> wrote:
Hi everyone,
I would like to make a 512 lipid bilayer from the 128 lipid model. Is it
possible to replicate the lipid molecules in x and y dimensions and if so
how can I do it?
Thank you
Maria
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Received on Fri Jul 05 2019 - 04:30:02 PDT
