Re: [AMBER] Issue installing Amber18 pbsa.cuda

--
Ray Luo, Ph.D.
Professor of Structural Biology/Biochemistry/Biophysics,
Chemical Physics, Biomedical Engineering, and Chemical Engineering
Department of Molecular Biology and Biochemistry
University of California, Irvine, CA 92697-3900
On Tue, Jun 25, 2019 at 8:04 PM David A Case <david.case.rutgers.edu> wrote:
>
> On Tue, Jun 25, 2019, Mahesh kumar Teli wrote:
> >
> >We are using gcc5.4 in our system. I have followed the suggested
> >instruction and still, installation is not completed and giving the
> >following error-
> >
> >/home/surendra/amber18/lib/libemil.a(setup.o): In function
> >`hsc::setUpNew(double*, double*, double*, double*)':
> >setup.C:(.text+0x151d): undefined reference to `VTT for
> >std::__cxx11::basic_stringstream<char, std::char_traits<char>,
> >std::allocator<char> >'
>
> Just a note to Ray and UCI folks: your pbsa.cuda target does the link
> with "-lstdc++".  Are you sure this is correct? Do you not need
> something like "-std c++11"?  All these errors are related to lack of
> cxx11 constructs, so my WAG is that this may require either more recent
> compilers, or more suitable linking flags.
>
> ...dac
>
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