Hi,
You can use e.g. 'vector box out box.dat' to get the box lengths from
any trajectory with box info. You can also get the unit cell vectors
with 'vector ucellx' etc. Alternatively you can grab them directly
from netcdf files with the 'ncdump' program, e.g. 'ncdump -v
cell_lengths > box.dat'.
Hope this helps,
-Dan
On Tue, Jun 4, 2019 at 1:43 PM Yuan Hu <Yuan.Hu.alkermes.com> wrote:
>
> Dear Amber Users,
>
> Is there a cpptraj command or other tools in Amber that allows me to write out the box dimensions (x,y,z) stored in my trajectory, e.g. md.nc ?
> Thanks.
>
>
> Best,
> Yuan
>
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Received on Tue Jun 04 2019 - 12:00:02 PDT
