Thank you very much for this David
It does not resolve the Apple CLANG compiler issues with CPPTRAJ, I have not had a chance to pursue the bug checking with cpptraj further though I’ll make an effort as soon as I have time.
I did however manage to compile without error using the GCC compilers from homebrew, this require you to link the correct compilers since Homebrew uses gcc-8/g++-8/c++-8, hence reverting to system gcc/g++/c++ = clang on Mac.:
export MACOSX_DEPLOYMENT_TARGET='10.14'
ln -s /usr/local/bin/gcc-8 /usr/local/bin/gcc
ln -s /usr/local/bin/g++-8 /usr/local/bin/g++
ln -s /usr/local/bin/c++-8 /usr/local/bin/c++
./configure -macAccelerate gnu
make install
…
Installation of AmberTools18 serial is complete at Tue Oct 16 12:42:35 CEST 2018
...
This seems to have worked, I only compiled and walked away since I’m teaching and have not yet managed to test the installation.
Anyway, thank you for all help and efforts so far.
Best regards
// Gustaf
On 15 Oct 2018, at 16:39, David A Case <david.case.rutgers.edu<mailto:david.case.rutgers.edu>> wrote:
export MACOSX_DEPLOYMENT_TARGET='10.14'
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Received on Tue Oct 16 2018 - 04:00:02 PDT
