[AMBER] Errors when installing with MPI

From: Felipe Franco Gonzalez <juan.franco.uam.es>
Date: Mon, 08 Oct 2018 22:49:03 +0200

When installing AMBER with mpi, it shows the following error message:

 

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_char'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `MPI_Comm_f2c'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_int'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_comm_null'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_op_max'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_op_lor'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_op_land'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_unsigned'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_double'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_unsigned_long'

~/amber18/lib/libfftw3_mpi.so: undefined reference to `ompi_mpi_op_sum'

collect2: error: ld returned 1 exit status

make[2]: *** [~/amber18/bin/mdgx.MPI] Error 1

make[2]: Leaving directory `~/amber18/AmberTools/src/mdgx'

make[1]: *** [parallel] Error 2

make[1]: Leaving directory `~/amber18/AmberTools/src'

make: *** [install] Error 2

 

  

---
Juan Felipe Franco-Gonzalez, PhD
Post-doc Researcher
 
Universidad Autónoma de Madrid
School of Medicine
Phone: +34 91497 5387
 
 
 
 
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Received on Mon Oct 08 2018 - 14:00:04 PDT
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