[AMBER] Running a small minimization with amber 16 package

From: Debarati DasGupta <debarati_dasgupta.hotmail.com>
Date: Tue, 31 Jul 2018 16:34:26 +0000

Hi
I am running a minimization of a protein (230 residues) and in the first step of restrained minimization it works well. the rst file is unreadable according to Amber-16 as it is not ASCII format but in the next step of minimization the error pops up saying cannot open the min_restrain.rst file

My input is

Minimization
&cntrl
imin=1,
maxcyc=1000,
ncyc=500,
ntb=1,
cut=10.0,
igb=0,
ntr=0,
ntxo=2,
/


Error is

STOP PMEMD Terminated Abnormally!

  Unit 9 Error on OPEN: min_restrain.rst


Please help

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Received on Tue Jul 31 2018 - 10:00:03 PDT
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