[AMBER] Interpretation the result of pairwise per-residue MM/PB(GB)SA decomposition.

From: walkingintheair <walkingintheair.126.com>
Date: Thu, 5 Jul 2018 11:18:04 +0800 (CST)

Dear all,
Can anyone explains why there are two entries for each residue pair (residue1/residue2 & residue2/residue1) in the result of pairwise per-residue free energy decomposition of MM/PB(GB)SA? Which entry is the binding free energy of a residue pair or should I sum the two entries up to get the binding free energy of a residue pair?
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jul 04 2018 - 20:30:02 PDT
Custom Search