Re: [AMBER] AMBER TI more examples

From: David A Case <david.case.rutgers.edu>
Date: Tue, 29 May 2018 09:24:41 -0400

On Thu, May 24, 2018, Omoto, Kiyoyuki wrote:
>
> I am learning AMBER TI, but unfortunately it seems that there's only a
> couple of tutorials in Web.
>
> Do you have a tutorial for a more drug-like molecules complexed with a
> protein.

Just to be sure: did you look at this one:

   http://ambermd.org/tutorials/advanced/tutorial9/index.html

It covers small molecules binding to T4-lysozyme. It's true that the
molecules there are not all that "drug-like", but it still seems like a
pretty relevant tutorial, especially if you are having problems creating
input files and command-line scripts.

....dac


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Received on Tue May 29 2018 - 06:30:03 PDT
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