[AMBER] PROBLEM ENCOUNTERED WHILE UNDERGOING TUTUORIAL FOR ROOM TEMPERATURE IONIC LIQUID.

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From: Suman Bhaumik <suman.bhaumik.niser.ac.in>
Date: Sun, 21 Jan 2018 15:16:05 +0530

Hi everyone,

I have encountered a problem at the 5th step of room temperature ionic
liquid manual.

The error is like this atom doesnot have a type....
failed to generate parameters....
parameter file not saved....

All these are encountered after running the file commands.in

Please help me as I am not able to form the .prmtop file and proceed further

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chemical/x-mol2 attachment: acn.mol2

chemical/x-pdb attachment: acn.pdb

chemical/x-mol2 attachment: bf4.mol2

chemical/x-pdb attachment: bf4.pdb

chemical/x-mol2 attachment: bmi.mol2

chemical/x-pdb attachment: bmi.pdb

application/octet-stream attachment: commands.in

application/octet-stream attachment: input.inp

chemical/x-pdb attachment: ionic2.pdb

Received on Sun Jan 21 2018 - 02:00:02 PST

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