[AMBER] Bonds between residues are broken

From: Shilpa Gupta <guptashilpa0605.gmail.com>
Date: Fri, 8 Dec 2017 11:03:59 +0530

Dear Amber Users,
I have generated my initial structure which comprises of dendrimer solvated
in ionic liquid [BMIM][Cl] using packmol. The initial structure was
correctly bonded but after doing minimization bond between the residues of
solute are broken. I could not find any related issue in archives. What
could be the possible reason for this? Thanks in advance.

Shilpa Gupta
Research Scholar
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Received on Thu Dec 07 2017 - 22:00:02 PST
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