Dear Amber users
My protein system consist of two subunit chains alpha and beta each chain
consist four domains. I predicted the structure of both subunit chains now
i want to combine both structure subunits models, How i can combine them
in one pdb file. so that i can run the simulation on complete structure.
Kindly guide me.
I joined the structure by using pymol and try to ran the simulation but
during minimization my simulation stop with this error
/var/spool/torque/mom_priv/jobs/16340954.amino-alpha.arc-ts.umich.edu.SC:
line 6: 2535 Segmentation fault /nfs/amino-library/local/Amber$
Regards
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Nov 22 2017 - 13:30:03 PST
