[AMBER] Help Regarding Amber Tools

From: Jerrano Bowleg <jlb1692.msstate.edu>
Date: Mon, 20 Nov 2017 10:15:41 -0600

Hello Amber users,

I have performed a 100ns MD simulation on a protein-ligand complex and I
would like to do some analysis on that structure. Specifically, I am
working with an enzyme with two binding domains and I want to know how
binding of a ligand to one domain influences the other domain.

Can anyone suggest some type of analysis that I can do to answer this

Kind regards,

Jerrano L. Bowleg
Graduate Student & CGSA Vice-President
Dr. Steven Gwaltney Lab
Mississippi State University
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Received on Mon Nov 20 2017 - 08:30:04 PST
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