[AMBER] pdb snapshots

From: Lizelle Lubbe <LBBLIZ002.myuct.ac.za>
Date: Tue, 14 Nov 2017 12:49:39 +0000


I used the following to create pdb snapshots of my trajectory:
trajin filename.nc
trajout snapshot.pdb pdb offset 15 multi vdw pdbv3 conect keepext

Unfortunately the pdb extension is not kept (files are named snapshot.pdb.1 etc) and the conect records are not written at the end
Am I doing something wrong?


Lizelle Lubbe

PhD (Medical biochemistry) candidate
Department of Integrative Biomedical Sciences
University of Cape Town
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Received on Tue Nov 14 2017 - 05:00:02 PST
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