[AMBER] Creation of coordinate and topology file for protei-ligand complex

From: Ashok Kumar <kumarnoida17.gmail.com>
Date: Mon, 28 Aug 2017 21:33:00 +0530

Dear All,

I want to create topology file for protei-ligand complex, but it
display the below error

WARNING: There is a bond of 3.672093 angstroms between:
------- .R<NMET 82>.A<C 18> and .R<NMET 82>.A<CA 5>
WARNING: The unperturbed charge of the unit: -2.000000 is not zero.
FATAL: Atom .R<NMET 82>.A<H 20> does not have a type.
Failed to generate parameters
Parameter file was not saved.

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Received on Mon Aug 28 2017 - 09:30:02 PDT
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