Hi,
I am not sure how to do it AMBER but there is a way you can do it using Maestro-GUI (free to download).
https://www.schrodinger.com/kb/1006 here is the link.
This tutorial is to make membranes but you can tweak this to make phenol monolayer as well.
Best Regards
Elvis Martis
Mumbai, INDIA.
________________________________________
From: Ramin Salimi <ramin.salimi01.utrgv.edu>
Sent: 28 July 2017 03:06
To: amber.ambermd.org
Subject: [AMBER] How to make a phenol monolayer
Dear All
I have been trying to construct a phenol monolayer, but I don't know how to make one layer of that for my simulation.I mean, given the phenol pdb file, how can we build a layer out of that?
Any help would be greatly appreciated
Kind Regards
Ramin
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Received on Thu Jul 27 2017 - 21:00:03 PDT
