Re: [AMBER] error

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Wed, 12 Jul 2017 09:08:08 -0400

Hi,

Your best chance for obtaining help is to state exactly what steps you
did, e.g. what command or program is giving you the error, how did you
execute the program, how did you come up with the input and files for
the program, etc. Just posting error messages gives us very little to
go on.

-Dan

On Tue, Jul 11, 2017 at 12:22 PM, Rana Rehan Khalid <rrkhalid.umich.edu> wrote:
> Hi everyone I am facing this error kindly guide me
> +--- Sp0 probably means a new atom type is involved
> +--- which needs to be added via addAtomTypes
> ERROR: Comparing atoms
> .R<HEO 187>.A<ND 55>,
> .R<HEO 187>.A<NC 39>,
> .R<HEO 187>.A<NB 23>, and
> .R<HEO 187>.A<NA 2>
> to atoms
> .R<HEO 187>.A<ND 55>,
> .R<HEO 187>.A<NC 39>,
> .R<HEO 187>.A<O1 74>, and
> .R<HEO 187>.A<NA 2>
> This error may be due to faulty Connection atoms.
> !FATAL ERROR----------------------------------------
> !FATAL: In file [chirality.c], line 142
> !FATAL: Message: Atom named O1 from HEO did not match !
> !
> !ABORTING.
>
> Kind Regards
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Wed Jul 12 2017 - 06:30:03 PDT
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