HI,
Seems possible. You can try umbrella sampling.
DOI: 10.1002/wcms.66 this is the reference.
Best Regards
Elvis Martis
Mumbai, INDIA.
________________________________________
From: Xing <stecue.gmail.com>
Sent: 05 July 2017 07:54:12
To: AMBER Mailing List
Subject: [AMBER] pull a dimer apart in AMBER?
Dear Amber users,
I'm trying to "pull" a protein dimer apart in MD, or at least trying to
see if the dimer is still stable by applying a pair of force to a
certain pair of amino acid residues. Can I do that in AMBER or is there
any published literature about that?
Thanks and best wishes,
Xing
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Received on Tue Jul 04 2017 - 21:00:04 PDT
