[AMBER] RNA parameters for wc_helix

From: Supriyo Naskar <supriyo199331.gmail.com>
Date: Mon, 12 Jun 2017 09:11:53 +0000

Hello everyone,
Can anyone tell me what are the parameters should I give in the wc_helix
command to build ARNA.
The wc_helix has a form like this:
 wc_helix(string seq, string sreslib, string snatype,string aseq, string
areslib, string anatype,float xoff, float incl, float twist, float rise,
string opts )
The twist(32.7°) and rise(2.81 Å) I know for ARNA but what should I give in
place of "float xoff" and "float incl " ?

Thanks,

-- 
---------------------------------------------------
Regards,
Supriyo Naskar
PhD Student,
Department of Physics,
Indian Institute of Science, Bangalore.
---------------------------------------------------
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jun 12 2017 - 02:30:02 PDT
Custom Search