Re: [AMBER] RMSD

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Mon, 5 Jun 2017 17:20:51 -0400

no, .CA is not the default. You have told it to use the entire residue.

On Mon, Jun 5, 2017 at 5:19 PM, Thakur, Abhishek <axt651.miami.edu> wrote:

> Hi everyone,
>
>
> I was doing RMSD
>
> rms first out R_RMSD.out time 0.005 :1-544
>
>
> Here I have not mentioned .CA, is it that it has a default set up for .CA.
>
>
>
> thanking you,
>
> -AT
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jun 05 2017 - 14:30:03 PDT
Custom Search