David,
Thanks for your reply.
I followed your suggestions, did the uninstall and then
./configure gnu
source amber.sh
make install
That finished cleanly. I'm running make test now and will report back if I
have any issues
Also, per your question:
[root.t7910 ~]# perl -v
This is perl 5, version 16, subversion 3 (v5.16.3) built for
x86_64-linux-thread-multi
(with 34 registered patches, see perl -V for more detail)
Copyright 1987-2012, Larry Wall
Perl may be copied only under the terms of either the Artistic License or
the
GNU General Public License, which may be found in the Perl 5 source kit.
Complete documentation for Perl, including FAQ lists, should be found on
this system using "man perl" or "perldoc perl". If you have access to the
Internet, point your browser at
http://www.perl.org/, the Perl Home Page.
[root.t7910 ~]#
Jim
-----Original Message-----
From: David Case [mailto:david.case.rutgers.edu]
Sent: Wednesday, April 19, 2017 3:28 PM
To: jimkress_58.kressworks.org; AMBER Mailing List <amber.ambermd.org>
Subject: Re: [AMBER] Release of AmberTools17
On Wed, Apr 19, 2017, James Kress wrote:
> I'm getting disturbing output after doing "./update_amber --upgrade"
> and then recompiling. I am running RHEL Linux 7.3.
>
> ./update_amber --upgrade
> ./configure gnu
> source amber.sh
At this point, try typing "make uninstall"; then proceed to
> make install
If that doesn't help, edit $AMBERHOME/AmberTools/src/Makefile, and comment
out line 77 (that tries to install FEW).
Also, what does "perl -v" return on your system?
> Checking if your kit is complete...
> Looks good
> Only one of PREFIX or INSTALL_BASE can be given. Not both.
Hoping that maybe someone else will recognize this error.
Thanks for the report....dac
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Received on Wed Apr 19 2017 - 14:00:02 PDT
