On Sat, Mar 25, 2017, Abhilash J wrote:
>
> Please find the attached pdb file i used to generate the prepin file.
Your file has a very short distance (1.28 Ang) between O18 and HN1A: this
is confusing antchamber, which is trying to make a bond between these two
atoms. Try to move (rotate) the NH2 group out of the way, so it doesn't clash
with O18.
....good luck....dac
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Received on Tue Mar 28 2017 - 10:30:02 PDT
