Re: [AMBER] Installing AmberTools16 - ld library issue

From: Giannis Gl <igaldadas.gmail.com>
Date: Mon, 13 Mar 2017 18:14:52 +0000

You are awesome! Thank you so much!


On 13 March 2017 at 18:03, Hai Nguyen <nhai.qn.gmail.com> wrote:

> ah, we simplified the macos install a while ago in ambermd.org
>
> http://ambermd.org/amber_install.html
>
> In short, the recommended way is to use clang + binary gfortran
>
> Hai
>
> On Mon, Mar 13, 2017 at 1:37 PM, Daniel Roe <daniel.r.roe.gmail.com>
> wrote:
>
> > You also need a fortran compiler - I think the easiest one to install
> > is gfortran. You can get it via MacPorts, Homebrew, etc. See e.g.
> > http://jswails.wikidot.com/mac-os-x
> >
> > -Dan
> >
> > On Mon, Mar 13, 2017 at 1:32 PM, Giannis Gl <igaldadas.gmail.com> wrote:
> > > Dear Amber users,
> > >
> > > I am trying to install AmberTools16 on my MacBook (macOS Sierra,
> 10.12.3)
> > > but during the ./configure gnu proccess I get the following error:
> > >
> > > ld: library not found for -lgfortran
> > >
> > > clang: *error: *linker command failed with exit code 1 (use -v to see
> > > invocation)
> > >
> > > ./configure2: line 2348: ./testp: No such file or directory
> > >
> > > I have already installed the latest gcc distribution and Xcode but I
> > still
> > > get this error.
> > > Any ideas?
> > >
> > > Thanks,
> > > Yiannis
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
> >
> > --
> > -------------------------
> > Daniel R. Roe
> > Laboratory of Computational Biology
> > National Institutes of Health, NHLBI
> > 5635 Fishers Ln, Rm T900
> > Rockville MD, 20852
> > https://www.lobos.nih.gov/lcb
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Mon Mar 13 2017 - 11:30:03 PDT
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