[AMBER] Cannot convert rst to pdb file after md simulation.

From: Vatsal Purohit <vatsal.purohit15.gmail.com>
Date: Mon, 27 Feb 2017 12:29:13 -0500

Hello all,

I am trying to convert an rst file to pdb after running a short md
simulation and am getting the following error:

ATOMS DO NOT MATCH BETWEEN PARM AND MIN FILES 11374 0\

I used the following program:
$AMBERHOME/bin/ambpdb -p complex.top < complex-init-md.rst >
complex-init-md.pdb

and my .out file after the simulation looks fine so I'm not sure what's
wrong with the rst.

Kindly, advise.
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Received on Mon Feb 27 2017 - 09:30:03 PST
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