Re: [AMBER] Remove motion of center of mass after obtaining trajectory

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Fri, 30 Dec 2016 16:21:51 -0500

May be perform best fit RMSD to reference (starting) structure by cpptraj?

Hai

On Fri, Dec 30, 2016 at 2:54 PM, The Cromicus Productions <
thecromicusproductions.gmail.com> wrote:

> Hi everyone,
>
> I would like to know if there is an easy way to remove the motion
> of the center of mass of a molecule after I have obtained the
> trajectory (.mdcrd and .mdvel) files.
>
> Thanks a lot,
>
> Sebastian
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Dec 30 2016 - 13:30:02 PST
Custom Search