Re: [AMBER] error in amber 16 mpi installation

From: Michael Shokhen <michael.shokhen.biu.ac.il>
Date: Thu, 22 Dec 2016 19:31:23 +0000

Hi Dan,


The last line in the file fftw3_config.log is

configure: error: could not find mpi library for --enable-mpi


Could you please advise me how to correct the error?


Thank you,

Michael









*****************************
Michael Shokhen, PhD
Associate Professor
Department of Chemistry
Bar Ilan University,
Ramat Gan, 52900
Israel
email: shokhen.mail.biu.ac.il<https://webmail.biu.ac.il/owa/redir.aspx?C=a160ef9b9a6b4d06992402715d3ee465&URL=mailto%3ashokhen%40mail.biu.ac.il>
________________________________
From: Daniel Roe <daniel.r.roe.gmail.com>
Sent: Thursday, December 22, 2016 9:00:04 PM
To: AMBER Mailing List
Subject: Re: [AMBER] error in amber 16 mpi installation

On Thu, Dec 22, 2016 at 1:35 PM, Michael Shokhen
<michael.shokhen.biu.ac.il> wrote:
> Configuring fftw-3.3 (may be time-consuming)...
>
> Error: FFTW configure returned 1
> FFTW configure failed! Check the fftw3_config.log file
> in the /var/spool/scratch/shokhen/amber16/AmberTools/src directory.
> Configure failed due to the errors above!
>
> Your advice how to fix the error highly appreciated.

Did you follow the above suggestion? Are any errors reported in
'/var/spool/scratch/shokhen/amber16/AmberTools/src/fftw3_config.log'?

-Dan

--
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Thu Dec 22 2016 - 12:00:02 PST
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