[AMBER] Fwd: Normal Mode Analysis

From: Imma Speciale <i.spec88.gmail.com>
Date: Thu, 17 Nov 2016 14:47:45 +0100

---------- Forwarded message ----------
From: Imma Speciale <i.spec88.gmail.com>
Date: 2016-11-17 14:36 GMT+01:00
Subject: Normal Mode Analysis
To: amber-bounces.ambermd.org


Hi,
    I want to calculate the normal mode of my protein, using amber12.
    I have tried with mmpbsa, but it doesn't work, maybe why it plans the
usage
    of complex and ligand, and I have only one protein. I have also tried to
    construct the covariance matrix, but without results.
    Someone can help me suggesting a method to calculate these modes??
    Thanks
    Imma
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Received on Thu Nov 17 2016 - 06:00:07 PST
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