Re: [AMBER] Phosphoryated amino acids

From: Eiros Zamora, Juan <j.eiros-zamora14.imperial.ac.uk>
Date: Thu, 17 Nov 2016 10:21:26 +0000

May I also ask if the ff14SB compatible parameters are available anywhere?

Best,

Juan
> On 17 Nov 2016, at 09:35, Neha Gandhi <n.gandhiau.gmail.com> wrote:
>
> Amber has a library. Look for leaprc.phosaa10. These are compatible with
> ff99sb force fields.
>
> There are other webservers and they use ff03.
>
> HTH
> Neha
>
> On 17 Nov 2016 19:10, "Beale, John" <John.Beale.stlcop.edu> wrote:
>
>> I am looking for the address of the site on the web that listed parameters
>> for phosphorylated amino acids. Can someone help me?
>>
>> Thanks!
>>
>>
>> John M. Beale, Jr.
>> John M. Beale, Jr., Ph.D.
>> Professor of Medicinal Chemistry and Pharmacognosy
>> Saint Louis College of Pharmacy
>> 4588 Parkview Place
>> Saint Louis, Missouri 63110-1088
>> Office: 314-446-8461
>> Cell: 314-315-0409
>> FAX: 314-446-8460
>> John.Beale.stlcop.edu<mailto:John.Beale.stlcop.edu>
>>
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Received on Thu Nov 17 2016 - 02:30:04 PST
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