Hi,
Check the manual for the 'perres' and 'perresavg' keywords of the 'rmsd'
command (I believe an example is given).
-Dan
On Fri, Nov 11, 2016 at 3:48 AM Saman Yousuf ali <
saman.yousufali64.yahoo.com> wrote:
> Dear All,I have the AMBER 5ns MD trajectory, I want to calculate the
> average RMSD over all snapshots for each residue. Would you please tell me
> where I can get the cpptraj script to plot RMSD vs Residue Number.
> Thanks
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Nov 11 2016 - 04:30:02 PST
