Re: [AMBER] ambmask issue

From: Aseel Bala <balaahme.msu.edu>
Date: Thu, 10 Nov 2016 18:22:18 -0500

Worked well.
Thanks,

--
Aseel Bala Ahmed
Michigan State University
-----Original Message-----
From: Hai Nguyen [mailto:nhai.qn.gmail.com] 
Sent: Thursday, November 10, 2016 6:11 PM
To: AMBER Mailing List <amber.ambermd.org>
Subject: Re: [AMBER] ambmask issue
On Thu, Nov 10, 2016 at 6:08 PM, Aseel Bala <balaahme.msu.edu> wrote:
> Hi everyone,
> I am trying to select all molecules within 3 angstroms of a given set 
> of atoms using a mask.
>
> I have tried the following two syntax options:
>         qmmask='[(:226-240 <:3.0)]'
> or
>         qmmask='[:226-240 <:3.0]'
>
> But for both I get the following error:
>
>
>         Error in group input::atommask.f::tokenize
>         illegal symbol in maskstr:[
>
>
Like the error said here: "illegal symbol in maskstr:["
Try to remove "[" and "]"
Hai
> Does anyone see what I am doing wrong? Any help would be greatly 
> appreciated.
> Thanks,
> --
>
> Aseel Bala Ahmed
> PhD Candidate, Chemical Engineering
> Michigan State University
>
>
>
>
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Received on Thu Nov 10 2016 - 15:30:03 PST
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