Dear Anna,
You might be interested in:
http://q4md-forcefieldtools.org/REDDB/projects/F-90/
as you can see you can add as many phosphate groups you want and where
you want...
regards, Francois
> I am working with Uridine diphosphate (UDP) bonded with a sugar and
> I have some problems.
>
>
> First of all, I am using xleap or tleap to source the Glycam force
> field in order to define my sugar.
>
> Then, I sourced the RNA.OL3 force field to define the UDP group.
>
>
> The problem is that the RNA.OLE force field doesn't contain a
> template name to define UDP.
>
> So, how can I define the diphosphate or the extra phosphate?
F.-Y. Dupradeau
---
http://q4md-forcefieldtools.org/FyD/
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Received on Wed Nov 09 2016 - 03:00:03 PST
