On Mon, Oct 24, 2016, Gabriel Jara wrote:
>
> I am interested in performing a conformational sampling of the peptide in
> order to know its preferential conformations. I think about use accelerated
> molecular dynamics (aMD) for that.
Have you carried out ordinary MD simulations first? That might help isolate
the source of the problem. Also, which MD program are you using?
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Oct 25 2016 - 05:30:04 PDT