ANGLE
N.am-C.3-C.3 0.000 0.000
N.am-C.2-O.2 0.000 0.000
Read the docs and see the demos. If you are using amber, it's good to
know what an atom type name is.
Bill
On 10/19/16 9:29 AM, Thakur, Abhishek wrote:
> Hi Dr.Ross,
>
> I am sorry, I can't get what are you trying to say.
>
> can you explain me where I might be using '.'?
>
> For your reference I am attaching my frcmod and lib file
>
>
> Thanking you,
>
> Abhishek
>
> ________________________________
> From: Bill Ross <ross.cgl.ucsf.edu>
> Sent: Wednesday, October 19, 2016 5:18:29 AM
> To: AMBER Mailing List
> Subject: Re: [AMBER] frcmod file error
>
> angle param.
>
>
> On 10/19/16 9:16 AM, Bill Ross wrote:
>> Looks like a bond parameter. Sounds like you are using '.' in you atom
>> type names? Probably forbidden if so.
>>
>> Bill
>>
>>
>> On 10/19/16 9:06 AM, Thakur, Abhishek wrote:
>>> Hi ,
>>>
>>> I am trying to make a water box for my peptide.
>>>
>>> So while loading frcmod file I am getting an error
>>>
>>>
>>> Unknown keyword: C.3-C.3-S. in parameter file. Perhaps a format error?
>>>
>>>
>>> Can anyone tell me why is this happening?
>>>
>>> What should I do for it?
>>>
>>>
>>> Thanking you,
>>>
>>> AT
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org_mailman_listinfo_amber&d=DQICAg&c=y2w-uYmhgFWijp_IQN0DhA&r=0Hah93XWYYBgmROOVcaccg&m=7AbklWePdYi-jX1JaPHnOzApWu58Wxymh8KW2yhCFWM&s=2zBwiy80RDTfBwkrM33kBbUoP-lwbK7hvMK814LxgDw&e=
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org_mailman_listinfo_amber&d=DQICAg&c=y2w-uYmhgFWijp_IQN0DhA&r=0Hah93XWYYBgmROOVcaccg&m=7AbklWePdYi-jX1JaPHnOzApWu58Wxymh8KW2yhCFWM&s=2zBwiy80RDTfBwkrM33kBbUoP-lwbK7hvMK814LxgDw&e=
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org_mailman_listinfo_amber&d=DQICAg&c=y2w-uYmhgFWijp_IQN0DhA&r=0Hah93XWYYBgmROOVcaccg&m=7AbklWePdYi-jX1JaPHnOzApWu58Wxymh8KW2yhCFWM&s=2zBwiy80RDTfBwkrM33kBbUoP-lwbK7hvMK814LxgDw&e=
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Oct 19 2016 - 10:00:03 PDT
