[AMBER] cpptraj and selection

From: Dhiraj Srivastava <dhirajks.gmail.com>
Date: Sun, 9 Oct 2016 20:56:08 -0500

Hi All
         for the allignment and rmsd calculation, I am trying to use only a
range of residues and not the entire structure because of flexibility of
one domain. but the flexible domain is in the middle of structure. I tried
saveral diferent possibility but none of them appeared to work. like


and so on. but none of them is giving me correct number of residues used in
alignment. what's the best way to do this?

AMBER mailing list
Received on Sun Oct 09 2016 - 19:00:02 PDT
Custom Search