Re: [AMBER] FATAL: Atom .R<CLEU 124>.A<H13 34> does not have a type. Failed to generate parameters Parameter file was not saved.

From: David A Case <david.case.rutgers.edu>
Date: Wed, 14 Sep 2016 14:40:52 +0100

On Wed, Sep 14, 2016, shahab shariati wrote:

> FATAL: Atom .R<CLEU 124>.A<H04 25> does not have a type.

To expand on Bill's email, this means that you have an atom named "H04" in the
pdb file, which is not in the CLEU library unit. You need to fix the
residue and atom naming in the pdb file.

[Developers: can someone update this error message to make things clearer?
Same thing for the "Creating new atom..." message. Ideally, there would be a
counter, so that the extended help message is only printed once.]

...dac


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Received on Wed Sep 14 2016 - 07:00:03 PDT
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