I don't think there is any reason to except a homodimer to behave perfectly
symmetrically.
On Sep 10, 2016 8:58 PM, <tanfei777.sina.cn> wrote:
> Hello:
> I am currently using Sander to optimise a NMR protein structure, the
> structure is a homodimer, therefore, I think a a symmetric structure is
> what I want. I have already doubled my constraints, meaning the input NMR
> constraints are symmetric, however, the outcome structure is a little
> different on each monomeric unit, Is there A possible way to add symmetry
> besides adding symmetric constraints in the structure calculation process,
> where can I find it ??
>
> Thank You all very much!!
>
>
> Tan Fei
> NMR Centre From PKU
> PHD Candidate
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Sep 11 2016 - 05:00:02 PDT
